- users-list - monetdb.org

Announcement: New Aug2018 Feature release of MonetDB suite
by Sjoerd Mullender 31 Aug '18

31 Aug '18

The MonetDB team at CWI/MonetDB BV is pleased to announce the Aug2018 feature release of the MonetDB suite of programs. More information about MonetDB can be found on our website at <https://www.monetdb.org/>. For details on this release, please see the release notes at <https://www.monetdb.org/Downloads/ReleaseNotes>. As usual, the download location is <https://dev.monetdb.org/downloads/>. Aug 2018 feature release (11.31.7) MonetDB5 Server * The lsst module was moved to a separate repository (https://dev.monetdb.org/hg/MonetDB-lsst/) Build Environment * Build the MonetDB-cfitsio RPM and libmonetdb5-server-cfitsio Debian/Ubuntu package. * On Windows, the separate MonetDB5-Geom installer has been incorporated into the main MonetDB5-SQL installer and is therefore no longer available as a separate download. Merovingian * Added a "logrotate" configuration file. See /etc/logrotate.d/monetdbd. * Changed the monetdb profilerstart command to be more robust. If the server or stethoscope crashed before, the pid file is still there, so the next time we try to start stethoscope, it will fail. Now the profilerstart command will check if a stethoscope process with the recorded pid is running. If not, we start stethoscope, assuming that something went wrong before. * Changed the monetdb stop command to try to stop stethoscope before stoping the server. The error conditions that can arrise from attempting to stop stethoscope are: + The database is not running. + The profilerlogpath is not set. + The profiler.pid file does not exist or is inaccessible. + The contents of the profiler.pid are not valid. + Shutdown of stethoscope did not succeed. + Removing the profiler.pid file failed. In all the cases, the attempt to stop the server can continue normally, so we actually ignore any errors that rise from the attempt to stop stethoscope. Client Package * ODBC: Implemented SQL_ATTR_QUERY_TIMEOUT parameter in SQLSetStmtAttr. * ODBC SQLGetInfo now returns a positive numeric value for InfoTypes: SQL_MAX_COLUMN_NAME_LEN, SQL_MAX_DRIVER_CONNECTIONS, SQL_MAX_IDENTIFIER_LEN, SQL_MAX_PROCEDURE_NAME_LEN, SQL_MAX_SCHEMA_NAME_LEN, SQL_MAX_TABLE_NAME_LEN and SQL_MAX_USER_NAME_LEN. * Added a '-f rowcount' option in mclient to repress printing the actual data of a resultset, but only print the number of returned tuples Stream Library * Added support for lz4 compressed files in the stream library MonetDB Common * Hash indexes are now persistent across server restarts. * The macros bunfastapp and tfastins and variants no longer set the dirty flag of the heap they write to. This now needs to be done separately (and preferably outside of the inner loop). * Removed batDirty flag from BAT record. Its function is completely superseded by batDirtydesc and the dirty flags on the various heaps. * Removed "masksize" argument of function BAThash. * A whole bunch of functions that took an int argument that was used as a Boolean (true/false) value now take a value of type bool. The functions BATkeyed, BATordered and BATordered_rev now return a bool instead of an int. * Removed the tdense property: it's function is completely replaced by whether or not tseqbase is equal to oid_nil. Testing Environment * Removed helper programs Mtimeout and MkillUsers: they have long been superseded by timeout handling by Mtest.py itself. SQL Frontend * Removed deprecated table producing system functions: sys.dependencies_columns_on_functions() sys.dependencies_columns_on_indexes() sys.dependencies_columns_on_keys() sys.dependencies_columns_on_triggers() sys.dependencies_columns_on_views() sys.dependencies_functions_on_functions() sys.dependencies_functions_on_triggers() sys.dependencies_keys_on_foreignkeys() sys.dependencies_owners_on_schemas() sys.dependencies_schemas_on_users() sys.dependencies_tables_on_foreignkeys() sys.dependencies_tables_on_functions() sys.dependencies_tables_on_indexes() sys.dependencies_tables_on_triggers() sys.dependencies_tables_on_views() sys.dependencies_views_on_functions() sys.dependencies_views_on_triggers() They are replaced by new system dependency_* views: sys.dependency_args_on_types sys.dependency_columns_on_functions sys.dependency_columns_on_indexes sys.dependency_columns_on_keys sys.dependency_columns_on_procedures sys.dependency_columns_on_triggers sys.dependency_columns_on_types sys.dependency_columns_on_views sys.dependency_functions_on_functions sys.dependency_functions_on_procedures sys.dependency_functions_on_triggers sys.dependency_functions_on_types sys.dependency_functions_on_views sys.dependency_keys_on_foreignkeys sys.dependency_owners_on_schemas sys.dependency_schemas_on_users sys.dependency_tables_on_foreignkeys sys.dependency_tables_on_functions sys.dependency_tables_on_indexes sys.dependency_tables_on_procedures sys.dependency_tables_on_triggers sys.dependency_tables_on_views sys.dependency_views_on_functions sys.dependency_views_on_procedures sys.dependency_views_on_views * Implemented group_concat(X,Y) aggregate function which also concatenates a column of strings X, but using a supplied string Y as the separator. This function is also a SQL extension. * Implemented group_concat(X) aggregate function which concatenates a column of strings using a comma as a separator. This function is not featured in the SQL standard. Bug Fixes * 4020: Importing timestamp with zone from copy into * 6506: Improper performance counters * 6556: Sqlitelogictest division by zero on COALESCE call * 6564: Changes to the Remote Table definition * 6575: Sqlitelogictest crash on groupby query with coalesce call * 6579: Sqlitelogic test infinite loop while compiling SQL query * 6586: Sqlitelogictest crash on complex aggregation query * 6593: Poor performance with like operator and escape clause * 6596: Multicolumn aggregation very slow after ANALYZE when persistent hashes are enabled * 6605: Sqlitelogictest set queries with wrong results * 6606: Misleading parameter name in generate_series function * 6610: Sqlitelogictest algebra.rangejoin undefined * 6611: Cannot compile with GCC 8.1 and --enable-debug=no * 6612: Implement BLOB handling in python UDFs * 6618: dependency column on sequence violated by DROP SEQUENCE * 6621: SELECT FROM REMOTE TABLE WHERE <> returns wrong results * 6624: "Cannot use non GROUP BY column in query results without an aggregate function" when using aggregate function in both HAVING and ORDER BY clauses. * 6625: OR in subselect causes the server to crash with segmentation fault * 6627: stddev_pop inconsistent behaviour * 6628: User cannot insert into own local temporary table * 6629: CREATE TABLE IF NOT EXISTS returns 42000! * 6630: Sqlitelogictest cast NULL to integer failing * 6632: Dataflow causes crash when THRnew fails * 6633: ILIKE clauses don't work on certain characters * 6635: monetdbd exits due to "Too many open files" error * 6637: Within a transaction, \d after an error causes mclient to exit * 6638: (sequences of) mkey.bulk_rotate_xor_hash() can generate NIL from non-NIL making multi-col joins return wrong results * 6639: COMMENT ON TABLE abc IS NULL invalidly sets the remark column to null where remark column is defined as NOT NULLable

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Re: #!ERROR: THRnew: too many threads
by Stefan Manegold 14 Aug '18

14 Aug '18

Hi, The usual questions:Which version of MonetDBAndWhat kind of workload triggers this? Best,Stefan -------- Original message --------From: "Murthy, Gautham" <Gautham.Murthy(a)harman.com> Date: 13/08/2018 18:06 (GMT+01:00) To: users-list(a)monetdb.org Subject: #!ERROR: THRnew: too many threads Hello, We had a DB crash reported with the below messages, Do we need alter any system level parameters or changes to avoid the below issue – Server has 128 CPU and 1TB memory. 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads /etc/security/limits.conf monetadmin soft nproc 102400 monetadmin hard nproc 102400 monetadmin soft nofile 500000 monetadmin hard nofile 500000 monetadmin soft stack 10240 monetadmin soft memlock unlimited monetadmin hard memlock unlimited [monetadmin@lnx1535 DBFARM_TSV_P_B]$ /monet_binaries/MonetDB-11.27.13_PY/bin/monetdb -p 50010 get all TSV_PROD_DB_B name prop source value TSV_PROD_DB_B name - TSV_PROD_DB_B TSV_PROD_DB_B type default database TSV_PROD_DB_B shared default yes TSV_PROD_DB_B nthreads default 128 TSV_PROD_DB_B optpipe local sequential_pipe TSV_PROD_DB_B readonly local yes TSV_PROD_DB_B embedr default no TSV_PROD_DB_B embedpy local yes TSV_PROD_DB_B embedpy3 default no TSV_PROD_DB_B nclients local 2048 TSV_PROD_DB_B dbextra default <unknown> [monetadmin@lnx1535 DBFARM_TSV_P_B]$ 2018-08-13 08:46:30 MSG merovingian[36790]: target connection is on local UNIX domain socket, passing on filedescriptor instead of proxying 2018-08-13 08:46:30 MSG merovingian[36790]: proxying client 10.106.5.250:29929 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:46:30 MSG merovingian[36790]: target connection is on local UNIX domain socket, passing on filedescriptor instead of proxying 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:33 MSG merovingian[36790]: proxying client 10.106.5.250:29957 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:46:33 MSG merovingian[36790]: target connection is on local UNIX domain socket, passing on filedescriptor instead of proxying 2018-08-13 08:46:36 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:40 MSG merovingian[36790]: proxying client 10.106.5.250:64830 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:46:40 MSG merovingian[36790]: target connection is on local UNIX domain socket, passing on filedescriptor instead of proxying 2018-08-13 08:46:42 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:47:47 MSG discovery[36790]: new neighbour lnx1536.ch3.prod.i.com (lnx1536.ch3.prod.i.com) 2018-08-13 08:47:48 MSG discovery[36790]: new database mapi:monetdb://lnx1536.ch3.prod.i.com:50010/TSV_PROD_DB_B (ttl=660s) 2018-08-13 08:48:55 MSG merovingian[36790]: database 'TSV_PROD_DB_B' (57408) has crashed (dumped core) 2018-08-13 08:49:12 MSG merovingian[36790]: database 'TSV_PROD_DB_B' has crashed after start on 2018-08-13 05:35:17, attempting restart, up min/avg/max: 2h/5d/3w, crash average: 1.00 0.70 0.43 (23-10=13) 2018-08-13 08:49:12 MSG TSV_PROD_DB_B[72455]: arguments: /monet_binaries/MonetDB-11.27.13_PY/bin/mserver5 --dbpath=/monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B --set merovingian_uri=mapi:monetdb://lnx1535.ch3.prod.i.com:50010/TSV_PROD_DB_B --set mapi_open=false --set mapi_port=0 --set 2018-08-13 08:49:12 MSG TSV_PROD_DB_B[72455]: mapi_usock=/monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock --set monet_vault_key=/monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.vaultkey --set gdk_nr_threads=128 --set max_clients=2048 --set sql_optimizer=sequential_pipe --set embedded_py=true --readonly --set monet_daemon=yes 2018-08-13 08:49:12 MSG TSV_PROD_DB_B[72455]: 2018-08-13 08:49:12 MSG merovingian[36790]: proxying client 10.106.5.250:16467 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:49:12 MSG merovingian[36790]: proxying client 10.106.5.250:45439 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:49:12 MSG merovingian[36790]: starting a proxy failed: cannot connect: Connection refused 2018-08-13 08:49:12 ERR control[36790]: !monetdbd: an internal error has occurred 'cannot connect: Connection refused' 2018-08-13 08:49:12 ERR merovingian[36790]: client error: cannot connect: Connection refused 2018-08-13 08:49:12 MSG merovingian[36790]: proxying client 10.106.5.250:45447 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:49:12 ERR control[36790]: !monetdbd: an internal error has occurred 'cannot connect: Connection refused' 2018-08-13 08:49:12 MSG merovingian[36790]: starting a proxy failed: cannot connect: Connection refused 2018-08-13 08:49:13 ERR merovingian[36790]: client error: cannot connect: Connection refused 2018-08-13 08:49:13 MSG merovingian[36790]: proxying client 10.106.5.250:36605 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B /etc/security/limits.conf monetadmin soft nproc 102400 monetadmin hard nproc 102400 monetadmin soft nofile 500000 monetadmin hard nofile 500000 monetadmin soft stack 10240 monetadmin soft memlock unlimited monetadmin hard memlock unlimited [monetadmin@lnx1535 DBFARM_TSV_P_B]$ /monet_binaries/MonetDB-11.27.13_PY/bin/monetdb -p 50010 get all TSV_PROD_DB_B name prop source value TSV_PROD_DB_B name - TSV_PROD_DB_B TSV_PROD_DB_B type default database TSV_PROD_DB_B shared default yes TSV_PROD_DB_B nthreads default 128 TSV_PROD_DB_B optpipe local sequential_pipe TSV_PROD_DB_B readonly local yes TSV_PROD_DB_B embedr default no TSV_PROD_DB_B embedpy local yes TSV_PROD_DB_B embedpy3 default no TSV_PROD_DB_B nclients local 2048 TSV_PROD_DB_B dbextra default <unknown> [monetadmin@lnx1535 DBFARM_TSV_P_B]$

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#!ERROR: THRnew: too many threads
by Murthy, Gautham 13 Aug '18

13 Aug '18

Hello, We had a DB crash reported with the below messages, Do we need alter any system level parameters or changes to avoid the below issue - Server has 128 CPU and 1TB memory. 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads /etc/security/limits.conf monetadmin soft nproc 102400 monetadmin hard nproc 102400 monetadmin soft nofile 500000 monetadmin hard nofile 500000 monetadmin soft stack 10240 monetadmin soft memlock unlimited monetadmin hard memlock unlimited [monetadmin@lnx1535 DBFARM_TSV_P_B]$ /monet_binaries/MonetDB-11.27.13_PY/bin/monetdb -p 50010 get all TSV_PROD_DB_B name prop source value TSV_PROD_DB_B name - TSV_PROD_DB_B TSV_PROD_DB_B type default database TSV_PROD_DB_B shared default yes TSV_PROD_DB_B nthreads default 128 TSV_PROD_DB_B optpipe local sequential_pipe TSV_PROD_DB_B readonly local yes TSV_PROD_DB_B embedr default no TSV_PROD_DB_B embedpy local yes TSV_PROD_DB_B embedpy3 default no TSV_PROD_DB_B nclients local 2048 TSV_PROD_DB_B dbextra default <unknown> [monetadmin@lnx1535 DBFARM_TSV_P_B]$ 2018-08-13 08:46:30 MSG merovingian[36790]: target connection is on local UNIX domain socket, passing on filedescriptor instead of proxying 2018-08-13 08:46:30 MSG merovingian[36790]: proxying client 10.106.5.250:29929 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:46:30 MSG merovingian[36790]: target connection is on local UNIX domain socket, passing on filedescriptor instead of proxying 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:31 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:33 MSG merovingian[36790]: proxying client 10.106.5.250:29957 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:46:33 MSG merovingian[36790]: target connection is on local UNIX domain socket, passing on filedescriptor instead of proxying 2018-08-13 08:46:36 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:46:40 MSG merovingian[36790]: proxying client 10.106.5.250:64830 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:46:40 MSG merovingian[36790]: target connection is on local UNIX domain socket, passing on filedescriptor instead of proxying 2018-08-13 08:46:42 MSG TSV_PROD_DB_B[57408]: #!ERROR: THRnew: too many threads 2018-08-13 08:47:47 MSG discovery[36790]: new neighbour lnx1536.ch3.prod.i.com (lnx1536.ch3.prod.i.com) 2018-08-13 08:47:48 MSG discovery[36790]: new database mapi:monetdb://lnx1536.ch3.prod.i.com:50010/TSV_PROD_DB_B (ttl=660s) 2018-08-13 08:48:55 MSG merovingian[36790]: database 'TSV_PROD_DB_B' (57408) has crashed (dumped core) 2018-08-13 08:49:12 MSG merovingian[36790]: database 'TSV_PROD_DB_B' has crashed after start on 2018-08-13 05:35:17, attempting restart, up min/avg/max: 2h/5d/3w, crash average: 1.00 0.70 0.43 (23-10=13) 2018-08-13 08:49:12 MSG TSV_PROD_DB_B[72455]: arguments: /monet_binaries/MonetDB-11.27.13_PY/bin/mserver5 --dbpath=/monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B --set merovingian_uri=mapi:monetdb://lnx1535.ch3.prod.i.com:50010/TSV_PROD_DB_B --set mapi_open=false --set mapi_port=0 --set 2018-08-13 08:49:12 MSG TSV_PROD_DB_B[72455]: mapi_usock=/monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock --set monet_vault_key=/monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.vaultkey --set gdk_nr_threads=128 --set max_clients=2048 --set sql_optimizer=sequential_pipe --set embedded_py=true --readonly --set monet_daemon=yes 2018-08-13 08:49:12 MSG TSV_PROD_DB_B[72455]: 2018-08-13 08:49:12 MSG merovingian[36790]: proxying client 10.106.5.250:16467 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:49:12 MSG merovingian[36790]: proxying client 10.106.5.250:45439 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:49:12 MSG merovingian[36790]: starting a proxy failed: cannot connect: Connection refused 2018-08-13 08:49:12 ERR control[36790]: !monetdbd: an internal error has occurred 'cannot connect: Connection refused' 2018-08-13 08:49:12 ERR merovingian[36790]: client error: cannot connect: Connection refused 2018-08-13 08:49:12 MSG merovingian[36790]: proxying client 10.106.5.250:45447 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B 2018-08-13 08:49:12 ERR control[36790]: !monetdbd: an internal error has occurred 'cannot connect: Connection refused' 2018-08-13 08:49:12 MSG merovingian[36790]: starting a proxy failed: cannot connect: Connection refused 2018-08-13 08:49:13 ERR merovingian[36790]: client error: cannot connect: Connection refused 2018-08-13 08:49:13 MSG merovingian[36790]: proxying client 10.106.5.250:36605 for database 'TSV_PROD_DB_B' to mapi:monetdb:///monet_data02/DBFARM_TSV_P_B/TSV_PROD_DB_B/.mapi.sock?database=TSV_PROD_DB_B /etc/security/limits.conf monetadmin soft nproc 102400 monetadmin hard nproc 102400 monetadmin soft nofile 500000 monetadmin hard nofile 500000 monetadmin soft stack 10240 monetadmin soft memlock unlimited monetadmin hard memlock unlimited [monetadmin@lnx1535 DBFARM_TSV_P_B]$ /monet_binaries/MonetDB-11.27.13_PY/bin/monetdb -p 50010 get all TSV_PROD_DB_B name prop source value TSV_PROD_DB_B name - TSV_PROD_DB_B TSV_PROD_DB_B type default database TSV_PROD_DB_B shared default yes TSV_PROD_DB_B nthreads default 128 TSV_PROD_DB_B optpipe local sequential_pipe TSV_PROD_DB_B readonly local yes TSV_PROD_DB_B embedr default no TSV_PROD_DB_B embedpy local yes TSV_PROD_DB_B embedpy3 default no TSV_PROD_DB_B nclients local 2048 TSV_PROD_DB_B dbextra default <unknown> [monetadmin@lnx1535 DBFARM_TSV_P_B]$

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SQL Statements are skipped when run via scripts concurrently on different tables
by Murthy, Gautham 06 Aug '18

06 Aug '18

Hello, Application Teams are experiencing a behavior where few statements are skipped when executed via scripts, They are running multiple scripts concurrently on different tables. Please let us know if there are any know issues or a fix for the reported behavior. Database: MonetDB v11.27.13 (Jul2017-SP4) ü DROP, CREATE, INSERT - New SQL sequence, however looks like SQL statement are not executing as in order in database as per system catalog table log time entries. We need to check on this. ü First DROP, INSERT started and then after couple of statements, CREATE SQL started executing. DROP TABLE IF EXISTS "KEYFOOD_IT_S_22_43321_C";^M CREATE TABLE "KEYFOOD_IT_S_22_43321_C"(ATTR_NAME VARCHAR(500) NOT NULL, COL_NAME VARCHAR(30) NOT NULL, AVP_KEY INTEGER NOT NULL, ATTR_VALUE VARCHAR(3000), ATTR_LONG_VALUE VARCHAR(3000), ATTR_SHORT_VALUE VARCHAR(100), ATTR_MEDIUM_VALUE VARCHAR(100), PARENT_AVP_KEY INTEGER, SORT_ORDER INTEGER); INSERT INTO "KEYFOOD_IT_S_22_43321_C" (ATTR_NAME, COL_NAME, AVP_KEY, ATTR_VALUE, ATTR_LONG_VALUE, ATTR_SHORT_VALUE, ATTR_MEDIUM_VALUE, PARENT_AVP_KEY, SORT_ORDER) SELECT ATTR_NAME, COL_NAME, AVP_KEY, ATTR_VALUE, ATTR_LONG_VALUE, ATTR_SHORT_VALUE, ATTR_MEDIUM_VALUE, PARENT_AVP_KEY, SORT_ORDER FROM "IT_DSJ_KEYFOOD_43321" WHERE COL_NAME='S_22_KEY' AND SORT_TYPE='CATG'; We were able to statements being skipped in sys.querylog_catalog and sys.querylog_calls. Thank You, Gautham

2 1

incorrect data being fetched with WHERE clause
by Murthy, Gautham 06 Aug '18

06 Aug '18

Hello, Data is retrieved which are not available in "where" clause. Application teams have seen some cases where this works fine after some hours. After data load we are seeing incorrect data being fetched. Are there any know issues with the below versions ? Database: MonetDB v11.27.13 (Jul2017-SP4) sql>select * FROM "IT_DSJ_NCKLDN_45121" WHERE COL_NAME='M_59647_KEY' AND SORT_TYPE='ORTH'; +-------------------+--------------+------------+-------------------+-------------------+--------------------+--------------------+------+-------+------+ | attr_name | col_name | avp_key | attr_value | attr_long_value | attr_short_value | attr_medium_value | pare | sort_ | sort | : : : : : : : : nt_a : order : _typ : : : : : : : : : vp_k : : e : : : : : : : : : ey : : : +===================+==============+============+===================+===================+====================+====================+======+=======+======+ | ABRASIVE INFO | S_22_KEY | 30000 | N/A | N/A | N/A | N/A | null | 30000 | CATG | | ABRASIVE INFO | S_22_KEY | 30000 | N/A | N/A | N/A | N/A | null | 30000 | ORTH | | ABRASIVE INFO | S_22_KEY | 30000 | N/A | N/A | N/A | N/A | null | 30000 | ORTH | | ABSORBENCY LEVEL | S_23_KEY | 30000 | N/A | N/A | N/A | N/A | null | 30000 | CATG | | ABSORBENCY LEVEL | S_23_KEY | 30000 | N/A | N/A | N/A | N/A | null | 30000 | ORTH | | ABSORBENCY LEVEL | S_23_KEY | 30000 | N/A | N/A | N/A | N/A | null | 30000 | ORTH | | ACTIVE INGREDIENT | S_25_KEY | 30000 | N/A | N/A | N/A | N/A | null | 30000 | CATG | | ACTIVE INGREDIENT | S_25_KEY | 30000 | N/A | N/A | N/A | N/A | null | 30000 | ORTH | Thank You, Gautham

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Do "upserts" supports in MonetDB?
by Sharma, Sreejith 06 Aug '18

06 Aug '18

Hello, Is there any roadmap for implementing "upserts" or "merge" alike in oracle for MonetDB? Or is it already available? Regards, Sreejith

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Django + MonetDB
by ALEX OSSIPOV 05 Aug '18

05 Aug '18

Hi All I was looking to use MonetDB with Django framework but couldn't find MonetSQLdb package and all references point to 10 years old git code. Is it possible to use current versions of MonetDB with Django and where can I find required packages with configuration instructions? Thanks Alex

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outstanding updates
by Roberto Cornacchia 03 Aug '18

03 Aug '18

Hi, We are having a problem, for a while, that is difficult to isolate. Our ETL includes the following steps: 1) Open JDBC connection, add data to a table, commit, close connection 2) Open JDBC connection, some ALTER TALBLE statements, commit, close connection Occasionally, we get the following during step 2) : java.sql.SQLException: ALTER TABLE: set READ or INSERT ONLY not possible with outstanding updates (wait until updates are flushed) at nl.cwi.monetdb.jdbc.MonetConnection$ResponseList.executeQuery(MonetConnection.java:2732) What puzzles me is that step one is completed when this happens, the commit is done and the connection is closed (we triple-checked that is actually is closed). Notice that inserting a sleep between the to steps makes it work correctly. As I said, this is hard to isolate and reproduce. Still, can anyone guess what is exactly happening? Can it be that a background process is still flushing updates from step 1) ? Even if the JDBC connection is closed ? Can we force a blocking flush, so that it doesn't return until it's safe? If not, how can we know when updates are flushed? Thanks, Roberto

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Mercurial source compilation fails on Mac OS 10.13.5
by Ying Zhang 19 Jul '18

19 Jul '18

Dear all, Not sure how long this has been going on, but I was just trying to refresh my MonetDB installation (compiled from Mercurial source code), but it failed with the following errors: In file included from /Users/jennie/monet/Mar2018/sql/backends/monet5/UDF/pyapi3/pyapi3.c:13: /Users/jennie/monet/Mar2018/sql/backends/monet5/UDF/pyapi3/../pyapi/pyapi.c:968:18: error: assigning to 'char *' from 'const char *' discards qualifiers [-Werror,-Wincompatible-pointer-types-discards-qualifiers] retnames[i] = PyUnicode_AsUTF8(colname); ^ ~~~~~~~~~~~~~~~~~~~~~~~~~ /Users/jennie/monet/Mar2018/sql/backends/monet5/UDF/pyapi3/../pyapi/pyapi.c:1382:19: error: assigning to 'char *' from 'const char *' discards qualifiers [-Werror,-Wincompatible-pointer-types-discards-qualifiers] py_error_string = PyString_AS_STRING(error); ^ ~~~~~~~~~~~~~~~~~~~~~~~~~ Mac OS 10.13.5 Darwin Kernel Version 17.6.0 Happens with both Mar2018 and default branch Does anyone know how to fix these errors and get MonetDB compiled? Thanks in advance! Regards, Jennie

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Mar2018 production compilation fails on Fedora 28
by Roberto Cornacchia 19 Jul '18

19 Jul '18

Compiling from Mar2018 branch, today's hg tip, with production settings: --disable-debug --disable-developer --disable-assert --enable-optimize Fails with this on Fedora 28: In file included from /usr/include/string.h:494, from /home/roberto/MonetDBServer/MonetDB.Spinque_Mar2018/src/gdk/gdk.h:316, from /home/roberto/MonetDBServer/MonetDB.Spinque_Mar2018/src/gdk/gdk_calc.c:10: In function ‘memcpy’, inlined from ‘addstr_loop’ at /home/roberto/MonetDBServer/MonetDB.Spinque_Mar2018/src/gdk/gdk_calc.c:3415:3: /usr/include/bits/string_fortified.h:34:10: error: ‘__builtin_memcpy’ forming offset [3, 65535] is out of the bounds [0, 2] of object ‘str_nil’ with type ‘const char[2]’ [-Werror=array-bounds] return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest)); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ (same error in several files) Compiling with debug settings succeeds: --enable-debug --enable-developer --enable-assert --disable-optimize Is this reproducible or has it something to do with my machine?

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